Expression Profiler

EPCLUST

(cluster Expression profiles)

GENOMES

SPEXS

(Sequence Pattern Exhaustive Search)

URLMAP:

provide links

Structure

Pathways

Function

Hierarchical

K-means

Euclidean, correlation,

rank corr. distances...

GUI:

Download

(upstream)sequences

Study functional

annotations

Select genes

Flexible pattern

class selection

Exhaustive search

over pattern class

Requirements for

pattern occurrences

Multiple datasets

Study the clusters

Jaak Vilo

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